LMW-PTP 1XWW surface try

LMW-PTP Isoform B (1xww)

HTML 5 version (does not require Java; downloads and moves slowly)

buttons for calculations works best with Firefox
HTML 5 version calculations are slow
Based on tutorial by David Marcey, date accessed 8/25/15

I. Introduction

LMW PTP 1xww with SO4 removed
H atoms and charges added (at pH 5.5) with Autodock tools.

II. General Structure

Wireframe

Backbone

Display secondary structure

Calculate within Jmol a solvent surface that changes from gold to red to blue to white then translucent

Display a pre-calculated surface ("1xwwsurfacesolvent.jvxl"). Default color is gold. Note: loading a stored surface (*.jvxl) is much faster than calculating a surface (previous button).

Calculate Molecular Electrostatic Potential (MEP) within Jmol: red=negative, blue=positive

Load premade Molecular Electrostatic Potential (MEP) file: red=negative, blue=positive