| Day | Date Date | Read Before Class |
Do Before Class |
| 1 | 1/14 M A1 |
|
pretest assessment for bchm 322
|
| 2 | 1/16 W A3 |
Pre-Class Questions
Lipid
Structure: A. Lipid Structure - Question Passport to class: WB: a, b Workbook (WB): 4,5 |
|
| 3 | 1/18 F A5 |
Chapt 1C; Dynamics of membrane lipids;
Chapt 1D
- Lipids in Water: Thermodynamics (to red line)
|
Driving Force:
THERMODYNAMICS - A REVIEW; Molecular Mechanics and Dynamics: SUPPLEMENT - MOLECULAR MECHANICS AND DYNAMICS Pre-class Question:
1C
- Lipid Dynamics |
| 4 | 1/22 T A1 |
Chapt 1D - Lip Water: Thermodynamics Chapt 1E - Why Micelles, Bilayers? Chapt 1F - What's New? |
Lipids:
Lipid Structure 1F: LIPIDS AS
BIOLOGICAL SIGNALS Pre-Class Questions: Lipid Structure D. Lipids in Water - Thermodynamics - Question |
| 5 | 1/24 R A3 |
 Literature Learning Module:
Lipids |
This is a very difficult assignment. Don't panic. Do all of the
questions, but your group will be assigned to present one of them in class. Sapling Online Problems: Chapter 1- Lipids(now due 1/25 at 11:00 am) (X out of the browser if you wish to complete the Sapling assignment at a future date. Do not select the Exit icon within the Sapling assignment.) |
| 6 | 1/28 M A5 |
Chapt 2A - Prot/A. Acids
|
Amino Acids: Protein Structure 2A: THE STRUCTURE AND PROPERTY OF AMINO ACIDS Pre-Class Questions: Protein Structure: Structure and Properties of Amino Acids - Question |
| 7 | 1/30 W A1 |
Chapt 2B - Prot: Compo, Sequence, Conform. |
Proteins 1
Protein Structure 2B:
PROBING COMPOSITION, SEQUENCE, AND CONFORMATIONSapling Online Problems: Chapter
2-
Amino Acids |
| 8 | 2/1 F A3 |
Chapt 2C - Prot: Conformation |
Proteins 2: Protein Structure 2C:
UNDERSTANDING PROTEIN CONFORMATION |
| 9 | 2/5 T A5 |
Chapt 2D: Protein Folding/Stability |
Protein Folding and Degradation:
Protein
Structure 2D: PROTEIN FOLDING/STABILITY IN VIVO AND IN VITROSapling
Online Problems:
Thermo Review |
| 10 | 2/7 R B1 |
Chapt 2E: Lab Det ΔGo;
Chapt 2F: Thermo and IMF in Protein Fold/Stab.
|
Pre-Class Questions:
Determine the ΔGo
of unfolding from actual data
|
| 11 | 2/11 M B3 |
Chapt 2F: Thermo and IMF in Protein Fold/Stab. Finish |
Pre-Class Questions:
Protein Structure: F. Thermodynamics and IMF - H Bonds - Question Pre-Class Questions: Protein Structure: F. Thermodynamics and IMF - Hydrophobic Effect - Question Passport to Class: Changes in Protein Stability |
| 12 | 2/13 W B5 |
Chapt 2F: New Studies on Protein Stability (from GREEN LINE to end) Chapt 2G: Predict 20 and 3o struct; Chapt 2 H: Prot. Aggregates |
read In class modeling |
| 13 | 2/15 F B1 |
|
Sapling Online Problems: Chapter 2 - Proteins Problem Set 2C: Table Concept Map Due |
| 14 | 2/19 T B3 |
Mini Test 1:
Lipids and Proteins T 2/19-R 2/21
Carbohydrates 2: Chapter 3B: COMPLEX OLIGOSACCAHRIDES |
|
| Free Days, 21-22 | |||
| 15 | 2/25 M B5 |
Carbohydrate Jeopardy |
|
| 16 | 2/27 W B1 |
Chapt 5A: Binding - Eq.,
Curves Chapt 5B: Rev. Binding I |
Binding:
Chapt 5B: REVERSIBLE BINDING
2 Workbook: Pages 53-56
|
| 17 | 3/1 F B3 |
Chapt 5C: Mb, Hb and O2 to red line |
Myoglobin
and Hemoglobin: Chapt 5C: A MODEL BINDING SYSTEM -
MB, HB, AND DIOXYGEN
Pre-Class Questions: Binding: C. Hemoglobin and Myoglobin - Question |
| 18 | 3/5 T B5 |
Review top central dogma (to red line) |
Read |
| 19 | 3/7 R C1 |
Transcription: Chapt 5D: BINDING AND
THE CONTROL OF GENE TRANSCRIPTION
Pre-Class Questions: Binding: D. Transcription - Question |
|
| 20 | 3/11 M C3 |
Literature Learning Module:
Binding |
Extra Problem
Sets:
BINDING Due Electronically Submit 1 per table group
|
| 21 | 3/13 W C5 |
Mini Test 2:
CHO and Binding Wed 3/13-Fri 3/15
|
|
| 22 | 3/15 F C1 |
Enzyme Kinetics 1:
Chapt 6B: Rapid
Equilbrium and Steady State Kinetics Enzyme Kinetics 2: Chapt 6B: Rapid Equilbrium and Steady State Kinetics
|
|
| 23 | 3/19 T C3 |
Chapt
6C: Models of Inhib. Video: Inhib and Complicated Enz |
PROBLEM SET 4: THE CENTRAL DOGMA OF BIOLOGY Sapling Online Problems:
DNA, Genomics and Proteomics |
| 24 | 3/21 R C5 |
|
Do itSapling Online Problems: Chapter 6 Transport/Kin |
| Spring Break/Easter Recess: March 25-April 1 | |||
| 25 | 4/2 T C1 |
|
|
| 26 | 4/4 R C3 |
Enzyme Mechanisms: Chapt 7B:
MECHANISMS OF ENZYME-CATALYZED REACTIONSSapling
Online Problems: Organic Chem Review |
|
| 27 | 4/8 M C5 | PROBLEM SET 5: ELECTRON PUSHING In Class: students draw mechanisms. | |
| 28 | 4/10 W D1 | ||
| 29 | 4/12 F D3 |
|
Do itSapling Online Problems: Chapter 7: Catalysis |
| 30 | 4/16 T D5 |
Chapt 8A: Chem O2 Chapt 8B: Biol. Oxidation Rxs |
|
| 31 | 4/18 R D1 | Chapt 8B: Biol. Oxidation Rxs |
Pre-Class
Questions::
Using Reduction Potentials: Mini Test 3: Diffusion, Enzyme Kinetics, Enzyme Mechanisms Wed 4/17-Fri 4/19 |
| 32 |
4/22 M D3 |
Glycolysis:
Chapt 8C: ATP AND OXIDATIVE
PHOSPHORYLATION REACTIONS General Metabolism: Chapt 8C: ATP AND OXIDATIVE PHOSPHORYLATION REACTIONS
|
|
| SCHOLARSHIP AND CREATIVITY DAY: 4/24 | |||
| 33 | 4/25 R D5 |
Electron Transport:
Chapt 8C: ATP AND
OXIDATIVE PHOSPHORYLATION REACTIONS ATP Synthesis: Chapt 8C: ATP AND OXIDATIVE PHOSPHORYLATION REACTIONS Photosynthesis: Chapt 8D: PHOTOSYNTHESIS: THE LIGHT REACTION Pre-Class Questions: Signal Transduction: 9A. ATP - Question
|
|
| 34 | 4/29 M D1 |
Active Transport: Chapt 9A: ENERGY
TRANSDUCTION: USES OF ATP Pre-Class Questions: Signal Transduction: 9B. Nerves - Question |
|
| 35 | 5/1 W D3 |
|
|
| 36 | 5/3 F D5 |
Eric Kandel: Nobel Lecture, 2000 or Influenza and the 1918 Pandemic or Origin of Life or How do enzymes work? or Understanding everything |
Sapling Online Problems: Chapter 9 - Sig Trans (due 5/6/13 5 PM - extended) SALG Web Survey (complete by 5/6/13) Instrument Number:60667 Password: cookie name no caps no spaces (from email) (instructor) bu lao gou Complete above by 5/7/13, 5:00 pm |
| Final Exam: MAY 9, THURSDAY, 10:30 AM -12:30 PM - Computer Room - ASC 135 CSB | |||